New methods to isolate organic materials from silicified phytoliths reveal fragmented glycoproteins but no DNA

Rivka Elbaum, Cathy Melamed-Bessudo, Noreen Tuross, Avraham Levy, Steve Weiner

Research output: Contribution to journalArticlepeer-review

46 Citations (Scopus)

Abstract

Phytoliths are abundant in many archaeological sites, and can provide information on past vegetation. Very few analyses of their chemical composition have been made. Our measurements of the δ13C composition of modern wheat phytoliths suggest the presence of relatively large amounts of sugars and/or proteins in the water-soluble fraction, and lipids in the insoluble fraction. Other experimental approaches demonstrate that modern wheat phytoliths contain large quantities of glyco-conjugated proteins in a degraded state. One open question is whether or not phytoliths contain original DNA of the mother plant. Extracting protected ancient DNA from phytoliths would open many opportunities for progress in archaeobotanical studies. In order to address this question, we developed a method to dissolve phytoliths under conditions that do not degrade naked DNA, and showed that only a minimal amount of DNA was lost during the procedure. A hypersensitive assay did not, however, detect any DNA in extracts of phytoliths from an unburned phytolith-rich layer in Iron-Age sediments from Tel Dor, Israel. Extractions from modern phytolith samples of wheat also failed to provide any indication of DNA. We conclude that DNA is absent or not routinely recoverable in a random assembly of siliceous phytoliths.

Original languageEnglish
Pages (from-to)11-19
Number of pages9
JournalQuaternary International
Volume193
Issue number1-2
DOIs
Publication statusPublished - 1 Jan 2009

Funding

Bikura Foundation (Israel Science Foundation); Kimmel Center for Archaeological ScienceMany thanks to R. Gross-Shahack for helping in the wet ashing of modern wheat leaves, and to A. Shainskaya for performing the MS measurements. Funding was obtained from the Bikura Foundation (Israel Science Foundation) and the Kimmel Center for Archaeological Science at the Weizmann Institute.

All Science Journal Classification (ASJC) codes

  • Earth-Surface Processes

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